Local time:
| Time | Flight | Route | Airline | Aircraft | Status |
|---|---|---|---|---|---|
| Sunday, 12 July | |||||
| 18:15 | BC387 | Kagoshima (Kagoshima Airport) | Skymark Airlines | B738 (Boeing 737-82Y) | Estimated 17:58 |
| 18:30 | JL3737 | Kagoshima (Kagoshima Airport) | J-Air | E170 (Embraer E170STD) | Scheduled |
| Monday, 13 July | |||||
| 08:10 | JL3681 | Fukuoka (Fukuoka Airport) | Jet Linx Aviation | E70 | Scheduled |
| 09:25 | JC3721 | Kagoshima (Kagoshima Airport) | Japan Air Commuter | AT46 (ATR 42-600) | Scheduled |
| 09:40 | JL3725 | Kagoshima (Kagoshima Airport) | J-Air | E170 (Embraer E170STD) | Scheduled |
| 09:45 | JC3842 | Tokunoshima (Tokunoshima) | JAL Express | AT6 | Scheduled |
| 11:05 | JC3830 | Kikaiga Shima (Kikaiga Shima) | Japan Air Commuter | AT46 (ATR 42-600) | Scheduled |
| 11:10 | BC381 | Kagoshima (Kagoshima Airport) | Skymark Airlines | 738 | Scheduled |
| 11:20 | JL3727 | Kagoshima (Kagoshima Airport) | Jet Linx Aviation | E70 | Canceled |
| 11:25 | JL2465 | Osaka (Itami Airport) | Jet Linx Aviation | E90 | Scheduled |
| 12:35 | JL3729 | Kagoshima (Kagoshima Airport) | J-Air | E170 (Embraer E170STD) | Scheduled |
| 12:55 | JC3832 | Kikaiga Shima (Kikaiga Shima) | JAL Express | AT4 | Canceled |
| 13:10 | MM541 | Tokyo (Narita International Airport) | Peach | 320 | Scheduled |
| 13:25 | NU853 | Okinawa (Naha Airport) | Japan Transocean Air | DH4 | Canceled |
| 14:05 | JL659 | Tokyo (Haneda Airport) | Jet Linx Aviation | 737 | Scheduled |
| 14:05 | JL3731 | Kagoshima (Kagoshima Airport) | Jet Linx Aviation | E70 | Canceled |
| 14:45 | MM205 | Osaka (Kansai International Airport) | Peach | 320 | Scheduled |
| 15:30 | JC3862 | Yoronjima (Yoron Airport) | Japan Air Commuter | AT46 (ATR 42-600) | Scheduled |
| 15:35 | JL3733 | Kagoshima (Kagoshima Airport) | Jet Linx Aviation | E70 | Canceled |
| 17:10 | JC3834 | Kikaiga Shima (Kikaiga Shima) | Japan Air Commuter | AT46 (ATR 42-600) | Scheduled |
| 17:20 | JC3844 | Tokunoshima (Tokunoshima) | Japan Air Commuter | AT46 (ATR 42-600) | Scheduled |
| 17:50 | JL3735 | Kagoshima (Kagoshima Airport) | J-Air | E170 (Embraer E170STD) | Scheduled |
| 18:15 | BC387 | Kagoshima (Kagoshima Airport) | Skymark Airlines | 738 | Scheduled |
| 18:30 | JL3737 | Kagoshima (Kagoshima Airport) | J-Air | E170 (Embraer E170STD) | Scheduled |